Based on data from Snessor95 v2.1 - Important EB Sound Samples
Remember Snessor DOS numbering is weird...

Snessor 71 - "I Miss You" in Smiles and Tears
Snessor 74 - Camera Click

Sample 72  - "I Miss You" in Smiles and Tears
Sample 85  - The infamous Shigesato Itoi "OK desu ka"
Sample 86  - The big "Wow" when confirming setup
Sample 119 - Gulls and waves crashing in Summers
Sample 137 - Mysterious noise like crystal forest in Selentic Age (in Myst)
Sample 146 - Giygas muttering after Devil's machine shutoff. (Return to fight)
Sample 150 - Underlaying tone during Giygas death
Sample 153 - Ka-ching!
Sample 194 - Weird stuff!  Underlaying Giygas stuff?
Sample 201 - Noise like levitating object
Sample 211 - 1 second of hotelly sounding stuff
Sample 217 - Cave of the Past Noise
Sample 218 - Potential Venus sound
Sample 223 - Camera Click
Sample 228 - Rushing Water
Sample 236 - Bird Chirp
Sample 239 - Phone, or arcade beep
Sample 240 - Moonside Tunage